HeLa MCP Ecosystem
v1.0.0 (c2cdf68)
System Specification

Cellular Architecture & Dual-Backbone

The HeLa MCP Ecosystem organizes 10 specialized servers into a cohesive, deterministic organism governed by dual-backbone coordination and standard Model Context Protocol (MCP) JSON-RPC 2.0 stdio.

Foundation

The Dual-Backbone Coordination Model

Blotcat Cellular Architecture Conductor
Dual-Backbone Orchestration & Living Memory Graph Topology HELA TOPOLOGY
🧬 HeLa Mitosis chaining-mcp-server

Cognitive Orchestration Backbone: Responsible for intelligent task routing, iterative step-by-step reasoning via sequentialthinking, task decomposition, and dynamic peer MCP server discovery.

Entrypoint: dist/index.js • 18 Tools • Scope: Core
🧠 HeLa Genome Project-Guardian-mcp-server

Persistent State Backbone: Living SQLite knowledge graph (memory.db) with full-text FTS5 search, entity-relation tracking, decision memory, cross-session context restoration, and prompt injection defense.

Entrypoint: dist/index.js • 34 Tools • Scope: Core
Every profile in HeLa mounts Mitosis and Genome, ensuring any dispatched organelle retains full reasoning and persistent memory context.
Taxonomy

The 4-Tier Canonical Naming Model

To guarantee both conceptual clarity and complete technical independence, every server in the ecosystem operates across 4 distinct identity tiers:

Tier 1: Human Alias Tier 2: Machine ID Tier 3: Source Repo Tier 4: Technical Scope Cellular Function
HeLa Mitosis hela-mitosis chaining-mcp-server Core Task decomposition, dynamic routing, sequential reasoning
HeLa Genome hela-genome Project-Guardian Core Living knowledge graph, cross-session decision memory
HeLa Membrane hela-membrane filesystem-mcp-server Core Sandboxed workspace filesystem, deep search, archives
HeLa Nucleus hela-nucleus terminal-mcp-server Core Subshell execution containment & RTK token savings
HeLa Ribosome hela-ribosome menager-mcp-server Core Interactive PTY session multiplexing & Regex hooks
HeLa Enzyme hela-enzyme research-assistant-mcp-server Core Google Search, Wikipedia caching & fact checking
HeLa Cytosol hela-cytosol Browser-Agent Core Playwright browser automation & DOM accessibility trees
HeLa Phenotype hela-phenotype the-designer Specialized OKLCH tokens, brand design systems, Tailwind synthesis
HeLa Receptor hela-receptor scrcpy-mcp Specialized Android device control, ADB bridge & XML view inspection
HeLa Plastid hela-plastid ll3m-agent Specialized Blender procedural 3D modeling & render pipelines

In Recognition of Henrietta Lacks

The HeLa MCP Ecosystem is named in respectful recognition of Henrietta Lacks (1920–1951) and the immortal scientific legacy of HeLa cells, which transformed global biomedical research. In this architecture, HeLa represents modular specialization, deterministic replicability, and software longevity.

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